All things open source for Johns Hopkins University
The Open Source Programs Office serves as a central hub, empowering the Hopkins community to create, contribute to, and benefit from the full potential of open source software.
Innovative open source projects from Johns Hopkins University
The Johns Hopkins University Open Source Programs Office (OSPO) is happy to announce the next in our Explainer series, a collection of bite-sized videos tackling a variety of open-source essentials. […]
Join us for a celebration of open source innovation and collaboration! The Johns Hopkins University Open Source Programs Office (OSPO) would like to invite you to the culminating event of […]
The Johns Hopkins University Open Source Programs Office (OSPO) is happy to announce the next in our Explainer series, a collection of bite-sized videos tackling a variety of open-source essentials. […]
LiftOn is a homology-based lift-over tool using both DNA-DNA alignments (from Liftoff, credits to Dr. Alaina Shumate) and protein-DNA alignments (from miniprot, credits to Dr. Heng Li) to accurately map annotations between genome assemblies of the same or different species. LiftOn employs a two-step protein maximization algorithm to improve the annotation of protein-coding genes in the T2T-CHM13.
Splam is a splice site predictor utilizing a deep residual convolutional neural network for fast and accurate evaluation of splice junctions solely based on 400nt DNA sequences around donor and acceptor sites.